Table 2

Physical and genetic positions of published loci for resistance to Salmonella in fowl.

Chr¹

Locus type²

Locus name

Trait³

Position⁴cM

Mb

Ref

1

MSAT

ADL0160

ABR to SE vaccine

33

5.93

[15]

QTL

-

CSWB counts (SE)

85

33.57

[14]

QTL

-

CSWB counts (ST)

207

68.52

[14]

MSAT

ADL0020

ABR to SE vaccine

Splenic and caecal loads (SE)

286

94.16

[12]

[78]

CG

CD28

Caecal load; ABR to SE vaccine

-

113.90

[62]

MSAT

ADL0198

ABR to SE vaccine

Splenic and caecal load (SE)

458

171.74

[12]

[78]

CG

IAP1

caecal load (SE)

Splenic load (SE)

-

186.92

[11]

[55]

2

QTL

-

CSWB counts (SE)

87

26.93

[14]

CG

MD-2

Splenic load (SE)

-

122.83

[62]

MSAT

MCW0051

ABR to SE vaccine

358

129.15

[15]

3

MSAT

MCW0083

ABR to SE vaccine

51

13.99

[15]

MSAT

MCW0024

ABR to SE vaccine

237

-

[15]

CG

TGF-β4

Caecal load (SE)

-

18.29

[11]

CG

TGF-β2

Caecal load (SE)

ABR to SE

-

20.54

[11]

[66]

CG

Gal13

Caecal load (SE)

-

110.20

[60]

CG

Gal12

Caecal load (SE)

-

110.21

[60]

CG

Gal11

Caecal load (SE)

-

110.21

[60]

CG

Gal7

ABR to SE vaccine

-

110.25

[64]

CG

Gal3

ABR to SE vaccine

Caecal load (SE)

-

110.26

[60]

[64]

CG

Gal5

Spleen load (SE)

-

110.27

[60]

4

CG

TRAIL

Spleen and caecal load (SE)

-

9.67

[63]

CG

IL-2

Caecal load (SE)

-

55.26

[11]

5

QTL

-

CSWB counts (ST)

100

36.10

[14]

QTL

-

CSWB counts (SE)

111

39.28

[14]

QTL

QTL

SAL1

SAL1

Splenic load (ST)

Splenic load (ST)

157

-

53.24

54.00-54.80

[13]

[74]

MSAT

ADL0298

ABR to SE vaccine

Splenic and caecal load (SE)

198

60.23

[12]

[78]

CG

TGF-β3

Caecal load (SE)

-

40.87

[63]

6

MSAT

ADL0138

ABR to SE vaccine

Splenic and caecal load (SE)

56

10.09

[12]

[78]

CG

PSAP

Splenic and caecal loads (SE)

-

13.02

[11]

[55]

7

CG

SLC11A1

Survival rate (ST)

Splenic and liver loads (SE)

Splenic load (SE)

Splenic load (SE); number of contaminated organs

Splenic load (SE); ABR to SE vaccine

Caecal load (SE)

80

23.91

[10]

[7]

[55]

[9]

[61]

[79]

8

MSAT

ADL301

ABR to SE vaccine

80 EL

25.10

[15]

11

QTL

-

Caecal load (SE); CSWB counts

18

3.66

[14]

15

CG

IGL

Caecal load

ABR to SE vaccine

-

8.17

[11]

[63]

16

QTL

-

Caecal load

2

0.10

[14]

CG

MHC1

Splenic load (SE)

-

-

[55]

CG

MHC class I α1 domain

ABR to SE vaccine

-

0.04

[80]

CG

MHC class I α2 domain

ABR to SE vaccine

0.04

[80]

CG

MHC class I β1 domain

ABR to SE vaccine

0.06

[80]

17

CG

TLR4

Survival rate (ST)

Survival rate (ST)

Number of contaminated organs

-

4.06

[10]

[54]

[9]

MSAT

ADL0293

ABR to SE vaccine

26

6.39

[15]

19

CG

CASP1

Caecal load

-

0.64

[11]

CG

iNOS

Caecal load

-

9.17

[11]

26

CG

PIGR

Splenic and caecal loads

-

0.00

[59]

CG

MAPKAPK12

Splenic and caecal loads

-

2.35

[59]

CG

IL10

Splenic and caecal loads

-

2.37

[59]

28

MSAT

LEI0135

ABR to SE vaccine

0

0.18

[15]

¹Chromosome

²CG: candidate gene; MSAT: microsatellite

³ABR: antibody response; CSWB: cloacal swabs; ST: S. Typhimurium; SE: S. Enteritidis

⁴Physical positions were obtained by searching the Ensembl Genome Browser http://www.ensembl.org/index.html webcite with the original Accession Number given by the authors. QTL positions were calculated according to physical positions of flanking molecular marker.

Calenge et al. Genetics Selection Evolution 2010 42:11   doi:10.1186/1297-9686-42-11